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Table 2 Predicted target sites in the 3’-UTR of genes involved in the cholesterogenic pathway for downregulated miRNAs

From: A genome-wide survey for prion-regulated miRNAs associated with cholesterol homeostasis

miRNA

Coordinates (NCBIM37)

Number of targets

Hgmcs1

Hgmcr

Idi1

Fdft1

CYP51

Sc4mol

Ldlr

Srebf2

mmu-miR-139-5p

7: 108623890–108623957 [+]

    

1

   

mmu-miR-330*

7: 19766814–19766911 [+]

1

2

 

1

  

2

 

mmu-miR-125b-3p

9: 41390009–41390085 [+]

  

1

1

1

 

1

 

mmu-miR-690

16: 28600021–28600129 [−]

    

1

   

mmu-miR-378*

18: 61557489–61557554 [−]

    

2

   

mmu-miR-503

X: 50407161–50407231 [−]

  

1

2

  

2

 

mmu-miR-503*

X: 50407161–50407231 [−]

 

1

      

mmu-miR-351

X: 50406432–50406530 [−]

1

1

1

 

1

 

5

3

mmu-miR-542-5p

X: 50402580–50402664 [−]

  

1

     
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BMC Genomics

ISSN: 1471-2164

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