Table 1 Genes clustering with SITs
From: Whole transcriptome analysis of the silicon response of the diatom Thalassiosira pseudonana
| Â | SIT 1 Cluster |
|---|---|
Thaps3_ protein ID | Protein Characteristics |
9632 | Hypothetical protein, serine rich, homolog to 10796 |
10796 | Hypothetical protein, serine rich, homolog to 9632 |
21968 | Diatom-specific protein with conserved domain |
25551 | Hypothetical protein |
263046 | Helicase, putative |
263454 | Trypsin-like serine protease |
264646 | Inverting glycoside hydrolase with beta-1,4-glucanase activity |
268895 | SIT 1, silicon transporter |
1802_bd | Hypothetical protein |
739_bd | Signal recognition particle receptor subunit alpha |
| Â | SIT2 Cluster |
Thaps3_ protein ID | Protein Characteristics |
41392 | SIT2, Silicon transporter |
21087 | Hypothetical protein (123 aa) SP present, co-regulated with SIT2 under Si- |
11091 | Serine Threonine Protein kinase catalytic domain |
5510 | Glycosyltransferase family 10, alpha 1,3 fucosyltransferase |
3131 | Probable serine/threonine-protein kinase |
24636 | Hypothetical protein |
23856 | Fanconi anemia group D2 protein homolog, involved in homology-directed DNA repair |
268582 | Probable DNA helicase |
38514 | Multiple TM domains, two domains of unknown function (DUF3593 and DUF2499) |
21292 | Citrate transporter |
263984 | SprT metalloprotease domain |
11282 | Mannosyltransferase domain |
21856 | Hypothetical protein |
7999 | Hypothetical protein |
8280 | Hypothetical protein |
4756 | FlgN and Tat binding interacting protein domain |