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Table 6 Distribution of informative reads and DE bins in annotated lincRNA regions

From: Intronic RNAs constitute the major fraction of the non-coding RNA in mammalian cells

Time point (hours)

Informative reads

Informative reads that overlap with genic lincRNA regions*

% of Informative reads that overlap with genic lincRNA regions

Informative reads that overlap with intergenic lincRNA regions*

% of Informative reads that overlap with intergenic lincRNA regions

Non-exonic DE bins**

Non-exonic DE bins in genic linc RNA regions*

% of Non-exonic DE bins in genic linc RNA regions*

Non-exonic DE bins in intergenic linc RNA regions*

% of Non-exonic DE bins in intergenic linc RNA regions*

0

58,995,885

1,472,090

2.5 %

420,117

0.7 %

     

3

67,176,485

1,619,443

2.4 %

482,092

0.7 %

19,433

214

1.1 %

147

0.8 %

6

64,713,929

1,626,306

2.5 %

474,877

0.7 %

8,912

89

1.0 %

78

0.9 %

12

50,425,532

1,268,052

2.5 %

348,418

0.7 %

8,376

84

1.0 %

72

0.9 %

24

52,751,370

1,342,859

2.5 %

387,030

0.7 %

10,128

130

1.3 %

73

0.7 %

48

49,007,599

1,278,355

2.6 %

359,202

0.7 %

8,688

86

1.0 %

65

0.7 %

  1. *As defined by the Additional file2: Table S1 from Guttman et al., 2009[33].
  2. **Relative to the control time point.