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Table 6 Functional Annotation Clustering of statistically-significant under-expressed genes in European eel silver males from the river Tiber site (N = 8) in comparison with silver males from the lake Bolsena site (N = 7)

From: Surviving in a toxic world: transcriptomics and gene expression profiling in response to environmental pollution in the critically endangered European eel

Annotation Cluster Gene
Annotation Cluster 1 Actin alpha 1, skeletal muscle
(Enrichment Score: 6.78) Actin-related protein 2/3 complex, subunit 3
  Chromodomain helicase DNA binding protein 2
  Collagen, type I, alpha 1
  Collagen, type I, alpha 2
  DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
  Dynein light chain 2
  Eukaryotic translation initiation factor 2 subunit 1 alpha
  Eukaryotic translation initiation factor 3 subunit 2 beta
  Eukaryotic translation initiation factor 3 subunit J
  Heterogeneous nuclear ribonucleoprotein D-like
  Isoleucyl-tRNA synthetase
  Keratin 8
  Mitochondrial ribosomal protein 63
  Mitochondrial ribosomal protein L13
  Mitochondrial ribosomal protein L15
  Mitochondrial ribosomal protein L17
  Mitochondrial ribosomal protein L23
  Mitochondrial ribosomal protein L38
  Mitochondrial ribosomal protein L45
  Mitochondrial ribosomal protein S18B
  Mitochondrial ribosomal protein S18C
  Mitochondrial ribosomal protein S23
  Mki67 (FHA domain) interacting nuclear phosphoprotein
  Profilin 2
  Ribosomal protein S8
  Ribosomal protein S29
  SDA1 domain containing 1
  Seryl-tRNA synthethase
  Slow myosin heavy chain 2
  Small nuclear ribonucleoprotein D1 polypeptide
  Small nuclear ribonucleoprotein D3 polypeptide
  Small nuclear ribonucleoprotein polypeptide E
  Small nuclear ribonucleoprotein polypeptide F-like
  Thrombospondin 1
  Thrombospondin 4b
  Titin a
  Tubulin, alpha 8 like 2
  Tubulin, alpha 8 like 4
  Tubulin, beta 5
  Vessicle-associated membrane protein, associated protein B and C
Annotation Cluster 2 ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b
(Enrichment Score: 4.69) ATP synthase, H+ transporting, mitochondrial F0 complex, subunit e
  ATP synthase, H+ transporting, mitochondrial F0 complex, alpha subunit 1
  ATPase, H+ transporting, lysosomal, V1 subunit H
  NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4
  NADH dehydrogenase (ubiquinone) Fe-S protein 4
  Chromatin modifying protein 5
  COX17 cytochrome c oxidase assembly homolog
  Cytochrome c oxidase subunit VIIa 2
  Frataxin
  Heat shock protein 9
  Mitochondrial ribosomal protein 63
  Mitochondrial ribosomal protein L15
  Mitochondrial ribosomal protein L23
  Mitochondrial ribosomal protein L45
  Nuclear cap binding protein subunit 2
  SDA1 domain containing 1
  Solute carrier family 25, member 16
  Succinate dehydrogenase complex, subunit A, flavoprotein
  Succinate dehydrogenase complex, subunit B, iron sulfur
  Succinate dehydrogenase complex, subunit D, integral membrane protein A
  Succinate dehydrogenase complex, subunit D, integral membrane protein B
  Succinate dehydrogenase complex, subunit A, flavoprotein
  Transcription factor B2
  Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1