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Table 3 Comparison of gene expression in different samples

From: Combining laser microdissection and RNA-seq to chart the transcriptional landscape of fungal development

comparison upregulated with 3’ UTR1 downregulated with 3’ UTR1
veg / sex 6 83% 117 72%
wt proto / sex 284 88% 2305 39%
pro1 proto / sex 222 85% 2292 39%
pro1 proto / wt proto 551 66% 742 63%
  1. Numbers of genes that are significantly up- or down-regulated when comparing the different samples. veg, vegetative mycelium; sex, sexual mycelium; wt proto, wild-type protoperithecia; pro1 proto, protoperithecia from mutant pro1.
  2. 1The percentage of the up- or down-regulated genes for which a 3’ UTR could be modeled from the RNA-seq data is indicated.
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