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Table 1 Description of datasets used in the study GEO identifiers indicate the GSE ID for the study

From: LRpath analysis reveals common pathways dysregulated via DNA methylation across cancer types

Source GEO GEO GEO GEO TCGA TCGA TCGA TCGA TCGA TCGA
17648 21304 22867 26126
Tumor Type Colon Multiple Myeloma Glioblastoma Prostate Breast Kidney Lung AC Lung SCC Ovarian Stomach
Normal Sample # 22 3 4 71 27 199 24 27 8 57
Cancer Sample # 22 161 77 71 67 199 24 27 39 57
P-value < 0.01 7922 4489 1403 9151 6672 10664 6419 6738 4376 8436
P-value < 0.01 and at least 10% change in average methylation 5642 4343 1179 3263 3888 2022 3847 3641 1900 3000
Matched Yes No No Yes No Yes Yes Yes No Yes