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Table 5 Sequence divergence between MEAM1 and Asia II 3

From: Analysis of a native whitefly transcriptome and its sequence divergence with two invasive whitefly species

% Differences

 

% CpG

% GC

Loci

mean

SE

Compared kb

ts/tve

5' UTRsa

7.33

37.36

210

    

 All

   

3.35

0.21

22.11

1.47

 No CpG

   

3.05

0.21

20.49

1.34

 CpG

   

8.28

1.03

1.62

2.38

CDSb

7.13

43.44

2966

    

 All

   

1.73

0.02

1434.41

2.94

 No CpG

   

1.29

0.02

1332.11

2.53

 CpG

   

7.77

0.12

102.30

4.17

nd sitesc

6.27

44.17

2966

    

 All

   

0.47

0.02

840.49

1.43

 No CpG

   

0.42

0.02

787.78

1.29

 CpG

   

1.27

0.07

52.71

2.41

4d sitesd

12.07

37.64

2966

    

 All

   

5.30

0.07

200.59

2.18

 No CpG

   

3.43

0.06

176.37

1.55

 CpG

   

20.11

0.36

24.22

3.52

3' UTRs

4.68

35.74

337

    

 All

   

2.91

0.16

46.95

2.01

 No CpG

   

2.52

0.15

44.75

1.68

 CpG

   

12.42

0.97

2.20

4.48

  1. aUTRs: untranslated regions.
  2. bCDS: coding sequence.
  3. cnd sites: non-degenerative sites.
  4. d4d sites: fourfold-degenerate sites where no changes cause any amino acid replacement.
  5. ets/tv: ration of transitions (ts) over transversions (tv).
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