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Table 2 Integration analysis of ESTs/genes with previously reported quantitative trait loci (QTL) related to fiber quality*

From: Toward allotetraploid cotton genome assembly: integration of a high-density molecular genetic linkage map with DNA sequence information

Chromosome

qFE

qFL

qFF

qFS

qFU

QTL Total

ESTs/genes

A1(Chr.1)

1

0

1

0

1

3

4

A2(Chr.2)

0

1

0

0

0

1

2

A3(Chr.3)

0

1

0

0

0

1

1

A4(Chr.4)

0

0

0

0

0

0

0

A5(Chr.5)

0

0

0

0

1

1

2

A6(Chr.6)

1

0

1

0

1

3

3

A7(Chr.7)

0

0

0

0

0

0

0

A8(Chr.8)

3

0

3

3

1

10

40

A9(Chr.9)

0

4

1

2

1

8

11

A10(Chr.10)

0

0

0

0

0

0

0

A11(Chr.11)

3

1

0

0

1

5

26

A12(Chr.12)

0

0

0

0

1

1

6

A13(Chr.13)

1

1

0

0

0

2

5

D1(Chr.15)

0

0

0

0

1

1

6

D2(Chr.14)

1

1

0

0

0

2

20

D3(Chr.17)

0

1

2

0

1

4

28

D4(Chr.22)

1

0

0

0

0

1

2

D5(Chr.19)

0

1

0

0

0

1

15

D6(Chr.25)

3

0

2

0

0

5

11

D7(Chr.16)

1

0

3

4

0

8

34

D8(Chr.24)

10

13

9

13

3

48

60

D9(Chr.23)

1

3

1

1

3

9

12

D10(Chr.20)

1

0

1

1

1

4

11

D11(Chr.21)

1

0

1

3

1

6

8

D12(Chr.26)

0

1

1

1

0

3

10

D13(Chr.18)

1

1

3

0

0

5

21

At

9

8

6

5

7

35

100

Dt

20

21

23

23

10

97

237

Total

29

29

29

28

17

132

337

  1. * The fiber quality traits mainly included fiber length (FL), fiber strength (FS), fiber fineness (FF), fiber elongation (FE), and fiber uniformity (FU). QTL related to fiber quality traits were reported previously from references [39–53].