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Table 3 Proportion of reads mapping to exons, introns or within 1 Kb upstream or downstream of the annotated genes

From: Liver transcriptome profile in pigs with extreme phenotypes of intramuscular fatty acid composition

Animal1

% Exons

% Introns

% _5’ or _3’2

L1

60.44

16.44

5.03

L2

66.48

13.59

4.06

L3

65.52

13.06

5.31

L4

63.35

14.71

4.57

L5

62.86

12.71

4.6

H1

63.54

13.52

5.44

H2

62.1

15.08

4.78

H3

64.87

14.11

4.28

H4

65.95

11.12

5.46

H5

66.46

12.98

4.44

  1. 1 L1 to L5 and H1 to H5 correspond to animals of the L and H groups, respectively.
  2. 2 Reads located either 1 Kb upstream or downstream of the annotated genes.
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BMC Genomics

ISSN: 1471-2164

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