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Table 1 Benchmark data of cDNA libraries

From: Evolutionary force in confamiliar marine vertebrates of different temperature realms: adaptive trends in zoarcid fish transcriptomes

Database parameter

P. brachycephalum

Z. viviparus

Total Number of reads

481,802

~400,000

Number assembled

338,993

349,102

Average of read length

321

221

Number of all contigs

65,565

53,447

Number of non-redundant contigs

64,634

53,313

Percentage of redundancy

1.42

0.25

  1. Overall statistical analyses of the sequencing runs of Z. viviparus data of the library generated by Kristiansson et al. 2009, in comparison to the library of the Antarctic eelpout P. brachycephalum. The resulting reads were set up to contigs with similar assembly techniques. Further analyses of the contig quality could be seen in Figure2.