Table 3 A selection of paralogous families of P. acidipropionici and close related genomes
Cluster functional annotation | Number of proteins found in: | |||
|---|---|---|---|---|
P. acidipropionici | P. acnes | P. freudenreichii | M. phosphovorus | |
ABC transporters | 54 | 45 | 34 | 59 |
ABC transporters | 20 | 11 | 1 | 13 |
ABC transporters | 18 | 9 | 1 | 12 |
ABC transporters | 9 | 8 | 4 | 19 |
ABC transporters | 8 | 2 | 4 | 3 |
ABC transporters | 7 | 3 | 2 | 6 |
ABC transporters | 7 | 3 | 2 | 6 |
ABC transporters | 5 | 1 | 2 | 1 |
ABC transporters | 4 | 2 | 1 | 1 |
MFS transporters | 10 | 3 | 10 | 21 |
Proton antiporters | 3 | 1 | 1 | 2 |
Anaerobic C4-dicarboxylate transporters | 0 | 2 | 2 | 0 |
Two-component system regulators | 24 | 13 | 14 | 48 |
Two-component system kinases | 8 | 3 | 4 | 11 |
Transcriptional regulators | 27 | 10 | 4 | 22 |
Transcriptional regulators | 9 | 5 | 5 | 12 |
Transcriptional regulators | 5 | 2 | 1 | 1 |
MarR family transcriptional regulators | 7 | 4 | 4 | 13 |
ArsR family transcriptional regulators | 3 | 1 | 3 | 20 |
Oxidoreductases | 23 | 9 | 8 | 29 |
Oxidoreductases | 12 | 8 | 10 | 36 |
Oxidoreductases | 12 | 4 | 4 | 21 |
Oxidoreductases | 11 | 5 | 7 | 21 |
Dehydrogenases | 8 | 2 | 4 | 15 |
Catalases | 1 | 1 | 1 | 0 |
Catalases | 1 | 0 | 0 | 1 |
Glycerol-3-phosphate dehydrogenases | 2 | 1 | 1 | 0 |
Glutathione S-transferases | 3 | 0 | 1 | 1 |
Aminotransferases | 8 | 3 | 5 | 8 |
Aminotransferases | 4 | 1 | 1 | 1 |
Amidotransferases | 3 | 1 | 1 | 1 |
Glycosyl transferases | 6 | 4 | 3 | 1 |
Glycosyl transferases | 3 | 1 | 0 | 0 |
Sugar kinases | 4 | 2 | 2 | 0 |
Polyphospate kinases | 1 | 1 | 1 | 1 |
Polyphospate kinases 2 | 1 | 1 | 1 | 3 |
Polyphosphate-dependent glucokinases | 1 | 1 | 1 | 2 |
Lipase esterases | 3 | 1 | 0 | 0 |
Alpha-galactosidase | 3 | 0 | 0 | 1 |
Putative sucrose-6-phosphate hydrolases (invertases) | 1 | 0 | 0 | 2 |
Plasmid maintenance system antidote proteins | 3 | 0 | 0 | 0 |
DNA-binding proteins | 2 | 0 | 0 | 11 |
HNH endonucleases | 6 | 0 | 0 | 0 |
HNH endonucleases | 2 | 0 | 0 | 0 |
Hypothetical proteins | 5 | 1 | 1 | 0 |
Hypothetical proteins | 5 | 0 | 0 | 0 |
Hypothetical proteins | 4 | 3 | 0 | 2 |
Hypothetical proteins | 3 | 0 | 0 | 1 |
Methylases | 0 | 0 | 2 | 2 |
S-layer proteins | 0 | 0 | 2 | 0 |
cAMP factors | 0 | 5 | 0 | 0 |
Adhesion proteins | 0 | 4 | 0 | 0 |
Magnesium chelatase | 0 | 2 | 0 | 1 |
Alpha-L-fucosidases | 0 | 2 | 0 | 1 |
Sialic acid transporters | 0 | 2 | 0 | 0 |
Endoglycoceramidases | 0 | 2 | 0 | 0 |
Adhesion proteins | 0 | 2 | 0 | 0 |
Lysophospholipases | 0 | 2 | 0 | 0 |
Triacylglycerol lipase precursors | 0 | 2 | 0 | 0 |