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Figure 3 | BMC Genomics

Figure 3

From: De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes

Figure 3

a) Species distribution by accounting all BLASTX hits in the Sanger-EST assembly b) Top-hit species distribution based on BLASTX alignments in the Sanger-EST assembly. c) Species distribution by accounting all BLASTX hits in the transcriptome assembly d) Top-hit species distribution based on BLASTX alignments in the IGA transcriptome assembly. Cultivated Solanum species are more frequent than wild type species (S. habrochaites or S. bulbocastanum). Within Capsicum species, there are more hits to C. annuum than C. chinense or other distantly related capsicum species such as C. chacoense.

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BMC Genomics

ISSN: 1471-2164

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