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Table 4 Summary of BLASTX searches to annotated protein databases for final assembly

From: Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote

  No. of contigs with hits No. of unique accessions No. of unique protein hits
Zebrafish RefSeq 87,931 19,711 19,711
Uniprot/Swiss-Prot 80,012 26,396 17,669
Total 94,476 - 25,144
  1. Final assembly containing 370,798 contigs was used to search the zebrafish RefSeq protein database and the Uniprot database to identify the homologous genes represented by the catfish expressed sequences.