Skip to main content

Advertisement

Table 1 Computational coverage of the protein sequence space

From: Dynamics of domain coverage of the protein sequence universe

Sequence spacea All proteins Protein regions All regions
  LC TM CC SP
Total sequence space aa 5.64E + 09 4.14E + 08 3.74E + 08 6.78E + 07 5.43E + 07 9.10E + 08
% 100 7.3 6.6 1.2 1.0 16.1
Domain space aa 2.90E + 09 2.72E + 08 1.20E + 08 4.65E + 07 4.62E + 07 4.84E + 08
% 51.4 9.4b 4.1b 1.6b 1.6b 16.7b
  1. aData for nr December 2011 is shown. Abbreviations: LC, regions of low complexity; TM, transmembrane regions; CC, coiled coils; SP, signal peptides.
  2. bShown as relative percentage with respect to the 51.4% of domain space.