Table 3 Motif sequences identified by MEME tools in apple Hsfs
Motif | Length | Best possible match |
|---|---|---|
1 | 50 | TDHIISWSDANNSFVVWDPPEFARDLLPKYFKHNNFSSFIRQLNTYGFRK |
2 | 29 | VDPDRWEFANEWFQRGQKHLLCNIHRRKH |
3 | 50 | LMQEIVRLRQQQQYTQNQLHAMNQRLQGMECRQQQMMSFLAKAMHNPGFL |
4 | 21 | LHKTGPPPFLCKTYDMVDDPA |
5 | 29 | YQQNPTGACVEVGKCGLWDEIERLKRDKN |
6 | 26 | CHKYMDGQIVKYQPPMNEAAKAMLRP |
7 | 29 | TPYTHPDIVNDIFWEQFWTARPICGNIEE |
8 | 50 | FEQSPHYPSQVTTGKLGLDAESTAFQFVDAALDELAITQGFLETPEQEGE |
9 | 28 | MLMSELAHMKKKCNEIIYFVANYVCMAW |
10 | 20 | GWDKSQNMNHITEQMGHLTS |
11 | 41 | QTDVVIPELTRIQGIVPEGNVDIPNANMIGEDIGNGFYMGM |
12 | 41 | EFEAFCSVNPLGAFDFTEKVSIPTSSMGGGGAEDVVVPPQP |
13 | 20 | HVHKNEKNRRITGYNKKRRL |
14 | 49 | IINPDAMLITKAPTGATNTRNSSQPGYGYTNGGGGHISCEVNYPTESTP |
15 | 50 | MSPKDESHPKSPPTSAEFDPESIGLSEFRPQVSAPLLGSQPIPSFTSPVM |
16 | 50 | PSNSYPSSMLLCNPQPPKHNGPNGNLNQLQGYYPAAPPPNAKQNPHHIMN |
17 | 49 | MIKQEDIWSMGFGVSAGMSTSMHELWGNPVNYDVPEMGVTGGLLDVWDI |
18 | 26 | AQPHQVGLNHHHHHHSPLGMNGHHHH |
19 | 50 | DGFIDPTSEVMNGSLPIDFDDISSDIEAFLKDWDDIIQNPGADEMDSTCA |
20 | 14 | EEECKNLKLFGVWL |
21 | 15 | VRRKFVKHQQHELSK |
22 | 45 | QQLMQKRMIKRELDGGDLGKRRRLPPAQGIESFDEWINDSLSFDC |
23 | 50 | FHQDFSSKLRLELSPAVSDMNLVSRSTQSSNEDGGSSTRKISEELKGAQM |
24 | 50 | GASSMVTEDPFFKGKSVLSPQQEANPERYVSFQEDLVKDRTFPELFSPGM |
25 | 41 | NSGSEKQPEVDAYMDGMEDFVVNPDFMKMLMDEKLSPVENH |
26 | 41 | FFPFPSRGSISPSDSDEQPNWCDSDSPPLLSPTGGINTNIN |
27 | 40 | PRMIQEIDYSAAAELGEKAKMVMMIAFTSSTAADDDKTTT |
28 | 11 | THVHDHQQQPP |
29 | 41 | ISSSPEAGFEMESFNRYPTPPEVQTASDWLRQRWFVDRVRA |
30 | 50 | CVSGVTLQEVPLTSGHGLPSVISETHSPPRVANPGTVMRSPFSDVNALVG |