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Table 1 General statistics of 454 sequencing and assembly for lily and tulip

From: Generation and analysis of expressed sequence tags in the extreme large genomes Lilium and Tulipa

Genotype Nr. reads Nr. reads after filtration Avg. read length bp Nr. assembled reads Singletons Nr. contigs Avg. EST length bp
Connecticut King 139,480 104,323(75%) 336 77,097(74%) 27,226(26%) 14,773 615
White Fox 326,539 221,597(68%) 338 182,393(82%) 39,204(18%) 21,898 663
Star Gazer 374,240 255,081(68%) 341 202,707(79.5%) 52,374(20.5%) 24,700 688
Trumpet 442,476 299,655(69%) 343 241,782(81%) 57,873(19%) 26,075 694
Lily-All 1,282,735 880,656(69%) 340 471,378(53.5%) 409,278(46.5%) 52,172 555
Cantata 310,973 207,229(67%) 389 158,007(76%) 49,222(24%) 17,646 625
Princeps 316,372 211,380(67%) 386 165,282(78%) 46,098(22%) 17,007 632
T. fosteriana 627,345 418,609(67%) 388 293,043(70%) 125,566(30%) 24,713 629
Kees Nelis 592,034 407,392(69%) 281 303,558(74.5%) 103,834(25.5%) 38,716 559
Ile de France 263,175 185,464(70%) 283 125,293(67.6%) 60,171(32%) 24,557 517
Bellona 221,334 149,768(67%) 278 109,309(34%) 40,459(27%) 14,325 522
T. gesneriana 1,076,543 742,624(69%) 281 536,776 (74%) 205,848(28%) 54,575 557
Tulip-All 1,703,888 1,378,898 314 827,772(60%) 551,126(40%) 81,791 514