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Table 4 SSR repeat description in lily and tulip

From: Generation and analysis of expressed sequence tags in the extreme large genomes Lilium and Tulipa

SSR motif Nr. contigs Total Nr. SSR* di-** Tri-** Tetra- Penta- Hexa-
Connecticut King 14,773 271 (1.9%) 85 (31%) 161 (59%) 4 6 15
White Fox 21,898 603 (2.8%) 216 (36%) 301 (50%) 51 12 23
Star Gazer 24,700 735 (3%) 299 (41%) 330 (45%) 66 13 27
Trumpet 26,075 745 (2.8%) 312 (42%) 341 (46%) 50 17 25
Cantata 17,646 696 (3.9%) 168 (24%) 449 (65%) 30 9 40
Princeps 17,007 683 (4%) 146 (21%) 468 (69%) 28 11 30
T. fosteriana 24,713 957 (3.9%) 216 (23%) 642 (67%) 45 15 39
Kees Nelis 38,716 881 (2.3%) 262 (30%) 491 (56%) 58 19 51
Ile de France 24,557 521 (2%) 140 (27%) 317 (61%) 33 12 19
Bellona 14,325 302 (2%) 80 (28%) 184 (64%) 9 11 18
T. gesneriana 54,575 1,302 (2.9%) 393 (30%) 719 (55%) 95 35 60
  1. * Percentage of SSR repeats calculated according to the total number of contigs.
  2. ** Percentage of SSR repeats from total nr. of SSRs.