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Table 5 Location of di- and tri-nucleotide repeats in lily and tulip contigs presented as a percentage of the total number of identified SSR in each cultivar in coding and UTR regions identified using ORF-Predictor software

From: Generation and analysis of expressed sequence tags in the extreme large genomes Lilium and Tulipa

  di-nucleotide repeats Tri-nucleotide repeats
  Coding region % UTR regions % Coding region % UTR regions %
Connecticut King 35 65 50 50
White Fox 28 72 44 56
Star Gazer 32 68 58 42
Trumpet 33 67 58 42
Cantata 32 68 57 43
Princeps 26 74 57 43
Kees Nelis 32 68 48 52
Ile de France 35 65 50 50
Bellona 43 57 52 48