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Table 2 RNA-Seq sequencing and coverage of the grapevine transcriptome for each biological replicate

From: Downy mildew resistance induced by Trichoderma harzianum T39 in susceptible grapevines partially mimics transcriptional changes of resistant genotypes

Treatmenta Replicateb Sequenced bases (Mbp)c Read length (bp)d Coverage (fold)e
C 1 1844 95 42
  2 1812 95 42
  3 1393 93 32
T39 1 2195 94 50
  2 3054 94 70
  3 2253 95 52
C+P.v. 1 1981 95 46
  2 2244 95 52
  3 2049 95 47
T39+P.v. 1 1999 94 46
  2 2500 94 57
  3 2028 95 47
  1. a Grapevine leaves of control (C), Trichoderma harzianum T39-treated (T39), Plasmopara viticola-inoculated control (C+P.v.) and P. viticola-inoculated T39-treated (T39+P.v.) plants.
  2. b Biological replicates (plants), numbered from 1 to 3.
  3. c Total bases (Mbp) sequenced by RNA-Seq analysis that passed the quality check.
  4. d Mean length (bp) of sequenced reads.
  5. e Coverage of the Pinot Noir grapevine transcriptome[77] Release 3 (43.5 Mbp)[78].