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Table 4 BLASTX and Blast2GO results divided by isotig length

From: A catalogue of putative unique transcripts from Douglas-fir (Pseudotsuga menziesii) based on 454 transcriptome sequencing of genetically diverse, drought stressed seedlings

 

All PUTs

< 501

501 – 1,000

1,001 – 1,999

> 2,000

Number of PUTs

170,859

106,296

42,760

19,589

2,214

Total sequence [Mbp]

96.5

35

26.4

29.7

5.4

Hits with nr

27.3%

13.5%

36.9%

75.5%

87.8%

Hits with ara

19.6%

7.9%

25.1%

64.4%

82.6%

Hits with picea

19.6%

8.5%

26.3%

58.7%

71.4%

Isotigs with assigned GO term

23.2%

11.9%

26.6%

63.9%

82%

  1. Results of similarity searches with BLASTX and functional annotation using Blast2GO subdivided by transcript length in bp.