Table 2 Comparison of pSGS p-values: local controls and iControlDB individuals
From: Pairwise shared genomic segment analysis in three Utah high-risk breast cancer pedigrees
Pedigree | Chromosome | Region | Length (Mb) | Local Controls (n=224) | iControlDB (n=1,490) |
|---|---|---|---|---|---|
pSGS | pSGS | ||||
1 | 4* | 37,542,764 - 54,575,432 | 17.0 | 0.0060 | 0.015 |
| Â | 7* | 16,704,212 - 31,213,647 | 14.5 | 0.0050 | 0.0060 |
| Â | 8 | 38,344,499 - 122,638,989 | 83.3 | 0.0025 | 0.0013 |
| Â | 10 | 28,738,098 - 49,576,878 | 20.8 | 0.019 | 0.014 |
| Â | 14* | 66,272,834 - 77,581,481 | 11.3 | 0.040 | 0.041 |
| Â | 16 | 359,567 - 8,197,462 | 7.8 | 0.041 | 0.044 |
| Â | 17 | 10,784,088 - 16,883,680 | 6.1 | 0.019 | 0.017 |
3 | 2 | 74,758,934 - 162,960,873 | 88.2 | 0.0040 | 0.0033 |
| Â | 4* | 47,003,076 - 88,807,556 | 41.8 | 0.013 | 0.013 |
| Â | 6 | 31,320,810 - 31,628,733 | 0.3 | 0.037 | 0.035 |
| Â | 7* | 11,358,235 - 96,674,424 | 85.3 | 0.0065 | 0.0055 |
| Â | 12 | 67,987,630 - 101,376,241 | 33.4 | 0.0095 | 0.0095 |
| Â | 14* | 56,883,760 - 99,254,712 | 42.4 | 0.0070 | 0.0055 |
| Â | 17 | 32,760,735 - 51,072,912 | 18.3 | 0.039 | 0.032 |
| Â | 18 | 8,247,249 - 50,460,551 | 42.2 | 0.017 | 0.012 |