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Table 1 Primers used in the first round of emulsion haplotype fusion PCR

From: Determination of haplotypes at structurally complex regions using emulsion haplotype fusion PCR

 

Primer name

Primer sequence (5’-3’)

Centromeric Emulsion PCR

F1

AATGCACGCTGGTATTCTGCAA

F2’R1

TTCTCTAGCCCATCCTTGCAGGCGGGAGAGAGGTTCCAGAGTTG

R2

TGGTGTTGGCTCAGCTGGAA

Telomeric Emulsion PCR system 1

F1

TTCATTGGCCACCCTGGACT

F2’R1

TTGCAGAATACCAGCGTGCATTCCCCCTGGAAACCTCAATCC

R2

CGGGAGAGAGGTTCCAGAGTTG

Telomeric Emulsion PCR system 2

F1

TGCCTCAGTCTTCCCCAAAG

F2’R1

TTGCAGAATACCAGCCTGCATTTTACCAGACGCCACCAGTCA

R2

CGGGAGAGAGGTTCCAGAGTTG