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Table 2 Examples of identified novel putative qnr sequences

From: A novel method to discover fluoroquinolone antibiotic resistance (qnr) genes in fragmented nucleotide sequences

Example #

Group

Source(s)

Contig length (aa)

Model bit score

Most similar plasmid-mediatedqnr

1

1

Metagenome:

214

356.9

QnrB37 (79% identity)

  

SRA: SRX032366

   

2

12

Metagenome:

218

131.2

QnrC (33% identity)

  

MG-RAST: 4441580

   

3

78

Chromosome:

213

326.4

QnrB28 (68% identity)

  

Dickeya dadantii 3937, NC_014500.1

   

4

81

Chromosome:

211

294.6

Qnr19 (66% identity)

  

Xenorhabdus bovienii SS-2004, NC_013892.1

   

5

199

Chromosome:

218

350.0

QnrC (72% identity)

  

Vibrio furnissii, CP002378.1