Table 2 Breakdown of taxonomic patterns of the KEGG modules
From: Evaluation method for the potential functionome harbored in the genome and metagenome
Pathway [203] | Structural complex [263] | ||
|---|---|---|---|
Major taxonomic pattern | Number (%) | Major taxonomic pattern | Number (%) |
Non-prokaryote | 79 (38.9) | Non-prokaryote | 81 (30.8) |
Prokaryote | 52 (25.6) | Bacteria-specific | 45 (17.1) |
Bacteria-specific | 25 (12.3) | Prokaryote | 42 (16) |
Gammaproteobacteria-specific | 8 (3.9) | Proteobacteria-specific | 24 (9.1) |
Euryarchaeota-specific | 6 (3) | Archaea-specific | 10 (3.8) |
Cyanobacteria-specific | 4 (2) | Cyanobacteria-specific | 10 (3.8) |
Proteobacteria-specific | 4 (2) | Firmicutes-specific | 10 (3.8) |
Alphaproteobacteria-specific | 3 (1.5) | Gammaproteobacteria-specific | 8 (3) |
Proteobacteria/Firmicutes/Actinobacteria | 3 (1.5) | Proteobacteria/Firmicutes | 4 (1.5) |
Archaea-specific | 2 (1) | Actinobacteria-specific | 3 (1.1) |
Chloroflexi-specific | 2 (1) | Alphaproteobacteria-specific | 3 (1.1) |
Crenarchaeota-specific | 2 (1) | Proteobacteria/Actinobacteria | 3 (1.1) |
Firmicutes-specific | 2 (1) | Gammaproteobacteria/Firmicutes/Fusobacteria | 2 (0.8) |
Actinobacteria-specific | 1 (0.5) | Actinobacteria/Verrucomicrobia/Nitrospirae | 1 (0.4) |
Betaproteobacteria-specific | 1 (0.5) | Betaproteobacteria-specific | 1 (0.4) |
Betaproteobacteria/Actinobascteria/ Cyanobacteria | 1 (0.5) | Euryarchaeota-specific | 1 (0.4) |
Betaproteobacteria/Chloroflexi | 1 (0.5) | Firmicutes/Actinobacteria | 1 (0.4) |
Cyanobacteria/Euryarchaeota | 1 (0.5) | Firmicutes/Fusobacteria | 1 (0.4) |
Cyanobacteria/Chlorobi | 1 (0.5) | Frmicutes-specific | 1 (0.4) |
Gammaproteobacteria/ Firmicutes/Cyanobacteria | 1 (0.5) | Gammaproteobacteria/Firmicutes | 1 (0.4) |
Proteobacteria/Actinobacteria | 1 (0.5) | Proteobacteria/Actinobacteria/Deonococcus-Thermus | 1 (0.4) |
Proteobacteria/Bacteroidetes | 1 (0.5) | Proteobacteria/Actinobacteria/Verrcomicrobia | 1 (0.4) |
Proteobacteria/Fusobacteria/ Gemmatimonadetes | 1 (0.5) | Proteobacteria/Chloroflexi/Deonococcus-Thermus | 1 (0.4) |
Proteobacteria/Firmicutes | 1 (0.5) | Proteobacteria/Chlamydiae/Chlorobi | 1 (0.4) |
Functional set [[4]] | Proteobacteria/Chlamydiae | 1 (0.4) | |
Major taxonomic pattern | Number (%) | Proteobacteria/Chrysiogenetes/Spirochaetes | 1 (0.4) |
Prokaryote | 3 (75) | Proteobacteria/Cyanobacteria | 1 (0.4) |
Non-prokaryote | 1 (25) | Proteobacteria/Cyanobacteria/Chlorobi | 1 (0.4) |
Signature [[3]] | Proteobacteria/Firmicutes/Actinobacteria | 1 (0.4) | |
Major taxonomic pattern | Number (%) | Proteobacteria/Magnetococcus | 1 (0.4) |
Proteobacteria-specific | 1 (33.3) | Proteobacteria/Magnetococcus/Aquificae | 1 (0.4) |
Betaproteobacteria-specific | 1 (33.3) | Â | Â |
Gammaproteobacteria-specific | 1 (33.3) | Â | Â |