Figure 1From: A model of binding on DNA microarrays: understanding the combined effect of probe synthesis failure, cross-hybridization, DNA fragmentation and other experimental details of affymetrix arraysProbe and Target Sequences. Sample probe sequence in blue. All unique target sequences that are 2 base pairs or longer and that are perfect reverse complements of the probe in black. Columns 1 and 2 have the corresponding k and j values for each target sequence. The bottom row counts the number of times each probe position binds to a different target fragment.Back to article page