Table 1 Description of the 33 differentially-expressed transcripts in sexual and asexual embryos
Functional group | Gene identity | Similarity | Commentaries | Fold change |
|---|---|---|---|---|
Oogenesis (7) | ACYPI009492-RA | nudel | oocyte dorsal/ventral axis formation, egg activation | 3.86 |
ACYPI56634-RA_0 | orb | oocyte axis specification, mRNA polyadenylation, germ cell development | 4.67 | |
ACYPI008811-RA | bicaudal-C | mitosis, oogenesis, ovarian follicle cell migration | 4.69 | |
ACYPI31336-RA | kelch | female germline ring canal formation, karyosome formation, oogenesis | 1.81 | |
Ap-nanos1 | nanos | female meiosis chromosome segregation, germ cell development, oogenesis | 3.69 | |
ACYPI23247-RA | putative kelch-like | female germline ring canal formation, karyosome formation, oogenesis | 1.69 | |
ACYPI46386-RA | putative kelch-like repeat | female germline ring canal formation, karyosome formation, oogenesis | -1.49 | |
Post-transcriptionnal | ACYPI00753-RA | lodestar | termination of RNA polymerase II transcription, female meiosis | 3.39 |
regulation (5) | ACYPI003103-RA | Gld2 | RNA polyadenylation, histone mRNA catabolic process, mRNA processing | 4.03 |
ACYPI50630-RA | Gle1 | poly(A)+ mRNA export from nucleus | 2.46 | |
ACYPI001842-RA | Pop2 | RNA metabolic process, nuclear-transcribed mRNA poly(A) tail shortening | 2.21 | |
ACYPI49482-RA | cbp20 | gene silencing by miRNA, production of siRNA involved in RNA interference | 2.11 | |
Epigenetic | ACYPI002182-RA | histone H2B.3 | chromatin assembly or disassembly, nucleosome assembly | 3.60 |
regulation (4) | ACYPI005639-RA | histone H1 | chromatin assembly or disassembly, nucleosome assembly | 2.85 |
ACYPI28709-RA | Suv4-20H1 | histone methylation, regulation of gene expression, epigenetic | 1.75 | |
ACYPI007975-RA | uhrf1 | DNA repair, cell cycle, methylated histone residues binding | 2.48 | |
Cell cycle (3) | ACYPI006224-RA | cyclin J | mitotic cell cycle, embryonic | 5.70 |
ACYPI007770-RA | clasp1 | cell division, exit from mitosis, condensed chromosome kinetochore | 1.48 | |
ACYPI009671-RA | Drp-1 | cytokinesis, intracellular distribution of mitochondria | 1.79 | |
Other (4) | ACYPI48893-RA | Arl6ip1 | cotranslational protein targeting to membrane | 4.25 |
ACYPI48336-RA | Lsd-1 | lipid particle organization, regulation of lipid storage | -2.86 | |
ACYPI34416-RA | pol protein | RNA dependant DNA Polymerase/Reverse Transcriptase | -1.92 | |
ACYPI010082-RA | Six4 | fat body development, gonad development, mesoderm development | 1.56 | |
No similarity (10) | ACYPI50301-RA | no similarity | 3.92 | |
ACYPI39347-RA | hypothetical protein | 2.70 | ||
ACYPI38914-RA | predicted protein | 2.04 | ||
ACYPI54656-RA | hypothetical protein | 2.12 | ||
ACYPI25970-RA | hypothetical protein | 3.86 | ||
ACYPI010052-RA | hypothetical protein | 3.78 | ||
ACYPI007465-RA | hypothetical protein | 2.53 | ||
ACYPI25088-RA | hypothetical protein | 2.20 | ||
ACYPI39770-RA | no similarity | 2.88 | ||
ACYPI005121-RA | hypothetical protein | -1.78 |