Skip to main content

Table 4 Comparison of microarray data and qRT-PCR of selected transcripts

From: A low protein diet during pregnancy provokes a lasting shift of hepatic expression of genes related to cell cycle throughout ontogenesis in a porcine model

Gene name

Microarray

 

qRT-PCR #

 

Correlation ##

 

p-value

FC

Regulation

p-value

FC

Regulation

Expr. values

94 dpc

       

CCND2

0.022

-1.25

down

0.0001

-1.83

down

0.47 *

NCAPG

0.019

-1.73

down

0.003

-1.58

down

0.47 *

MGMT

0.031

+1.12

up

0.011

+1.32

up

0.53 **

GADD45B

0.669

-1.08

n.r.

0.522

+1.17

n.r

0.68 ***

1 dpn

       

SDHB

0.0006

-1.19

down

0.028

-1.30

down

0.71 ***

CCND2

0.711

-1.06

n.r.

0.651

-1.09

n.r.

0.46 *

PPARGC1A

0.745

-1.03

n.r.

0.761

-1.04

n.r.

0.67 ***

188 dpn

       

PRKAA1

0.0004

-1.68

down

0.027

-1.40

down

0.77 ***

PRKAA2

0.009

-1.36

down

0.095

-1.25

down

0.10

PPARGC1A

0.126

-1.35

n.r.

0.105

-1.36

n.r.

0.86 ***

  1. CCND2 - cyclin D2; NCAPG - non-SMC condensin I complex, subunit G; MGMT - O-6-methylguanine-DNA methyltransferase; GADD45B - growth arrest and DNA-damage-inducible, β ; SDHB - succinate dehydrogenase complex, subunit B, iron sulfur (Ip); PPARGC1A - Peroxisome proliferator activated receptor γ coactivator-1α; PRKAA1 - 5'-AMP-activated protein kinase, catalytic α 1 chain; PRKAA2 - 5'-AMP-activated protein kinase, catalytic α 2 chain *calculated by factorial normalisation on RPL10 expression values; **p-value of pamn' rho; n.r. - not regulated