Table 3 Comparison of different methods for identifying functional peaks
| Method | Total number of peaks | Number of genes mapped | Intersection with SRC1-dependent genes |
|---|---|---|---|
| MACS p = 1E-10 | 1,286 | 684 | 44 |
| MACS p = 1E-8 | 1,966 | 996 | 57 |
| MACS p = 1E-5 | 4,678 | 2,054 | 123 |
| supervised-NB(th = 0.8,1:2) | 11,835 | 3,875 | 238 |