Skip to main content

Table 3 TFs that prefer regulation of h2h genes

From: A study on promoter characteristics of head-to-head genes in Saccharomyces cerevisiae

TF #h2h1 e-score2 f-score3 #PPI4 %PPI5 #gene6 %h2h7
STP2 7 0.375 4.358 3 42.9 235 6.0
RME1 6 0.240 3.437 0 0.0 156 7.7
PDR3 12 0.288 2.931 2 16.7 446 5.4
SFP1 22 0.335 2.452 0 0.0 432 10.2
GCN4 195 0.269 2.250 1 0.5 2,058 19.0
SFP1 42 0.335 2.225 0 0.0 886 9.5
RPN4 41 0.248 2.130 0 0.0 169 48.5
FHL1 57 0.273 2.101 0 0.0 1,120 10.2
MET4 757 0.330 2.034 26 3.4 19,090 7.9
  1. 1 Number of h2h gene pairs both bound/regulated by the TF. 2 Average co-expression of the h2h gene pairs. 3 Average functional similarity of the h2h gene pairs. 4 Number of the h2h gene pairs with interactions. 5 Ratio of the h2h gene pairs with interactions. 6 Number of genes bound/regulated by the TF with evidence. 7 Ratio of genes bound/regulated by the TF that are h2h genes.