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Table 3 Inconsistent expression ratios of 5p arm miRNA to 3p arm miRNA between tissues

From: miRNA arm selection and isomiR distribution in gastric cancer

Pre-miRNA Location N5p N3p Ratio_N53p T5p T3p Ratio_T53p Fold change
hsa-mir-17 MA:14-36;mi:51-72 4,767 2,266 2.1037 6,656 425 15.6612 7.44
hsa-mir-511-1 5p:16-36 39 903 0.0432 53 147 0.3605 8.35
hsa-mir-511-2 5p:16-36 39 903 0.0432 53 147 0.3605 8.35
hsa-mir-423 5p:17-39;3p:53-75 20,920 8,945 2.3387 1,708 6,266 0.2726 8.58
hsa-mir-30c-1 MA:17-39;mi:56-77 67,040 50 1,340.8000 8,685 64 135.7031 9.88
hsa-mir-135b MA:16-38;mi:55-76 360 19 18.9474 171 99 1.7273 10.97
hsa-mir-376a-1 mi:7-28;MA:44-64 1,646 14 117.5714 569 54 10.5370 11.16
hsa-mir-376a-2 3p:50-70 428 14 30.5714 99 54 1.8333 16.68
hsa-mir-335 MA:16-38;mi:52-73 3,509 110 31.9000 418 264 1.5833 20.15
hsa-mir-30b MA:17-38;mi:55-76 50,988 51 999.7647 3,931 89 44.1685 22.64
  1. Location column denotes the relative locations of mature miRNAs within their precursors. N5p, T5p individually denote the expression levels of 5p arm miRNA (determined by summing the read counts of all its isomiRs) in normal and tumor tissue; while, N3p, T3p denote the corresponding information of 3p arm miRNA. The N5p and N3p values shown in this study are normalized.