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Table 1 Comparison of prediction accuracy on PDBTM40

From: A graph-theoretic approach for classification and structure prediction of transmembrane β-barrel proteins

 

Residues

Strands

Method

Q 2

Specificity

Sensitivity

F-score

MCC

Specificity

Sensitivity

F-score

MCC

TMBpro

81.2 ± 6.1*

79.3 ± 7.9

84.2 ± 11.2

0.76 ± 0.1

0.61 ± 0.14

90.1 ± 15.0

94.2 ± 12.5

0.93 ± 0.12

0.85 ± 0.26

BBP

79.2 ± 5.4

78.4 ± 6.3

80.4 ± 9.9

0.74 ± 0.1

0.57 ± 0.12

91.4 ± 12.0

91.4 ± 11.3

0.92 ± 0.11

0.83 ± 0.22

  1. *Standard Deviation