Table 1 PtPAL (1-5) de novo transcriptome assemblies of P.taeda
From: The phenylalanine ammonia lyase (PAL) gene family shows a gymnosperm-specific lineage
MIRA1A | Uniscript2 | Uniscript length3 | Total seq4 |
|---|---|---|---|
PAL1/MIRA | P.taeda.JGI_rep_c1829 | 2081 | 295 |
PAL2/MIRA | P.taeda.JGI_rep_c1015 | 2660 | 392 |
PAL3/MIRA | P.taeda.JGI_rep_c9006 | 2826 | 142 |
PAL4/MIRA | P.taeda.JGI_rep_c4552 | 2474 | 155 |
PAL5/MIRA | P.taeda.JGI_rep_c10177 | 2269 | 62 |
Newbler 1B | Uniscript 2 | Uniscript length 3 | Total seq 4 |
PAL1/Newb | contig57512 | 3573 | 2924 |
PAL2/Newb | isotig35091 | 3022 | 606 |
PAL3/Newb | isotig22550 | 3110 | 506 |
PAL4/Newb | isotig41305 | 2538 | 279 |
PAL5/Newb | isotig35702 | 2278 | 87 |
SeqMan NGen 1C | Uniscript 2 | Uniscript length 3 | Total seq 4 |
PAL1/NGen | Contig347 | 3773 | 2746 |
PAL2/NGen | Contig13311 | 2889 | 560 |
PAL3/NGen | Contig5954 | 2370 | 223 |
PAL4/NGen | Contig26398 | 1798 | 154 |
PAL5/NGen | Contig50748 | 2277 | 75 |