Figure 1
From: Automated extraction and semantic analysis of mutation impacts from the biomedical literature
Open Mutation Miner (OMM) System Overview Input documents are processed through a text mining pipeline implemented in GATE, which (1) performs preprocessing; (2) detects mutation mentions; (3) detects protein properties; and (4) detects impact mentions and links the detected entities. Results can be exported in various formats, in particular by populating the OMM ontology.