Table 6 Mutation series detection evaluation
From: Automated extraction and semantic analysis of mutation impacts from the biomedical literature
| Mutation series detection (MutationFinder) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Document (PMID) | Correct | Partially C. | Missing | Spurious | Strict | Lenient | ||||
| P | R | F | P | R | F | |||||
| 10860737 | 13 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 12604240 | 11 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 12664592 | 4 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 12702265 | 1 | 0 | 7 | 0 | 100% | 12% | 22% | 100% | 12% | 22% |
| 12890481 | 26 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 12902331 | 51 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 15026177 | 13 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 17761677 | 1 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 19143837 | 40 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 9731776 | 1 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 14592457 | 1 | 0 | 102 | 0 | 100% | 1% | 2% | 100% | 1% | 2% |
| Average | 162 | 0 | 109 | 0 | 100% | 60% | 75% | 100% | 60% | 75% |
| Mutation series detection (MutationTagger) | ||||||||||
| Document (PMID) | Correct | Partially C. | Missing | Spurious | Strict | Lenient | ||||
| P | R | F | P | R | F | |||||
| 10860737 | 13 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 12604240 | 11 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 12664592 | 4 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 12702265 | 7 | 0 | 1 | 0 | 100% | 88% | 93% | 100% | 88% | 93% |
| 12890481 | 26 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 12902331 | 51 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 15026177 | 13 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 17761677 | 1 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 19143837 | 40 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 9731776 | 1 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
| 14592457 | 102 | 0 | 1 | 0 | 100% | 99% | 100% | 100% | 99% | 100% |
| Average | 269 | 0 | 2 | 0 | 100% | 99% | 100% | 100% | 99% | 100% |