Table 6 Mutation series detection evaluation
From: Automated extraction and semantic analysis of mutation impacts from the biomedical literature
Mutation series detection (MutationFinder) | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
Document (PMID) | Correct | Partially C. | Missing | Spurious | Strict | Lenient | ||||
| Â | Â | Â | Â | Â | P | R | F | P | R | F |
10860737 | 13 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
12604240 | 11 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
12664592 | 4 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
12702265 | 1 | 0 | 7 | 0 | 100% | 12% | 22% | 100% | 12% | 22% |
12890481 | 26 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
12902331 | 51 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
15026177 | 13 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
17761677 | 1 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
19143837 | 40 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
9731776 | 1 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
14592457 | 1 | 0 | 102 | 0 | 100% | 1% | 2% | 100% | 1% | 2% |
Average | 162 | 0 | 109 | 0 | 100% | 60% | 75% | 100% | 60% | 75% |
Mutation series detection (MutationTagger) | ||||||||||
Document (PMID) | Correct | Partially C. | Missing | Spurious | Strict | Lenient | ||||
| Â | Â | Â | Â | Â | P | R | F | P | R | F |
10860737 | 13 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
12604240 | 11 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
12664592 | 4 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
12702265 | 7 | 0 | 1 | 0 | 100% | 88% | 93% | 100% | 88% | 93% |
12890481 | 26 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
12902331 | 51 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
15026177 | 13 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
17761677 | 1 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
19143837 | 40 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
9731776 | 1 | 0 | 0 | 0 | 100% | 100% | 100% | 100% | 100% | 100% |
14592457 | 102 | 0 | 1 | 0 | 100% | 99% | 100% | 100% | 99% | 100% |
Average | 269 | 0 | 2 | 0 | 100% | 99% | 100% | 100% | 99% | 100% |