Table 3 Performance of the classifier depending on the SVM classification thresholds applied when using groups highly populated in disease mutations only
From: Prioritization of pathogenic mutations in the protein kinase superfamily
SVM threshold | Accuracy (%) | Precision (%) | Recall (%) | MCC |
|---|---|---|---|---|
-1.000 | 71.5 | 51.4 | 88.9 | 0.6 |
-0.750 | 77.0 | 61.7 | 81.5 | 0.6 |
-0.500 | 76.8 | 64.7 | 73.3 | 0.5 |
-0.250 | 79.4 | 68.1 | 69.9 | 0.5 |
0.000 | 71.6 | 60.7 | 56.3 | 0.4 |