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Table 4 Comparative results by DAPPLE for the top 30 genes in VEGAS-all, VEGAS-top, and minP data sets

From: Searching joint association signals in CATIE schizophrenia genome-wide association studies through a refined integrative network approach

 

VEGAS-all

VEGAS-top

minP

DAPPLE

   

# of direct interactions

4

1

3

# genes to prioritize

6

2

3

Mean associated protein direct connectivity

1.6

1.0

2.0

Mean associated protein indirect connectivity

58.1

6.1

7.5

DMS

   

# module genes

18

21

19