From: Effective normalization for copy number variation detection from whole genome sequencing
FREEC Normalization | UG1 | UG2 | YRI1 | YRI2 | CEU | CEf | Yh1 | KOR |
---|---|---|---|---|---|---|---|---|
GC content | 19% | 21% | 18% | 25% | 21% | 19% | 23% | 38% |
Mappability | 19% | 19% | 5% | 16% | 12% | 9% | 18% | 21% |
Control genome (in Population) | 15% | 28% | 20% | 12% | 22% | 21% | 23% | 37% |
Control genome (YRI1) | 31% | 32% | - | 12% | 20% | 17% | 20% | 36% |
Control genome (YRI2) | 15% | 22% | 20% | - | 25% | 19% | 24% | 26% |