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Table 3 Average precision for the union (+) of two methods.

From: Combining multiple ChIP-seq peak detection systems using combinatorial fusion

x + y Average precision Number
of regions
  Score combination Rank combination  
E + F = CisGenome + SISSRs 0.8114 0.7997 26371
D + E = QuEST + CisGenome 0.8190 0.8158 26457
D + F = QuEST + SISSRs 0.8204 0.8038 25574
C + D = PeakSeq + QuEST 0.8526 0.8475 22191
C + F = PeakSeq + SISSRs 0.8545 0.8559 22876
C + E = PeakSeq + CisGenome 0.8610 0.8522 24415
B + F = MACS + SISSRs 0.8880 0.8950 20767
B + D = MACS + QuEST 0.8883 0.8876 21242
B + E = MACS + CisGenome 0.8983 0.8977 20768
B + C = MACS + PeakSeq 0.8983 0.9033 19895
A + F = TRLocator + SISSRs 0.9126 0.9030 19673
A + B = TRLocator + MACS 0.9168 0.9158 20279
A + D = TRLocator + QuEST 0.9168 0.9071 20117
A + E = TRLocator + CisGenome 0.9193 0.9178 19720
A + C = TRLocator + PeakSeq 0.9199 0.9177 19281