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Table 3 Result of evaluating new families in miRBase17

From: Automatically clustering large-scale miRNA sequences: methods and experiments

Result

Correctly clustered families

Correctly clustered members

Correctly clustered new miRNAs belonged to existing families

Before feature selection

9

34

447

After feature selection

8

37

435

  1. After selecting 140 features with Isomap, the number of correctly clustered miRNAs that belonged to these new families increases from 34 to 37, while the number of correctly clustered new families decreases from 9 to 8.