|
q-value
|
Gene score
|
|---|
| |
≥0.5
|
≥1
|
≥1.5
|
≥2
|
= 2.5
|
|---|
|
q < 0.9
|
0.393 (6399)
|
0.367 (1863)
|
0.603 (399)
|
0.191 (866)
|
0.052 (178)
|
|
q < 0.8
|
0.525 (469)
|
0.292 (415)
|
0.441 (163)
|
0.310 (199)
|
0.131 (108)
|
|
q < 0.7
|
0.495 (8)
|
0.228 (164)
|
0.627 (5)
|
0.208 (117)
|
0.118 (72)
|
|
q < 0.6
|
0.286 (5)
|
N/A
|
N/A
|
0.225 (42)
|
0.093 (53)
|
|
q < 0.5
|
0.113 (5)
|
N/A
|
N/A
|
0.122 (39)
|
N/A
|
|
q < 0.4
|
0.012 (5)
|
N/A
|
N/A
|
0.101 (27)
|
N/A
|
- Based on Table 2, we used weight matrix 3 to rank genes (a total of 2458 genes) and then separated them according to their q-values. The number of SNPs in each q-value and score category based on COGA dataset is shown in parentheses. N/A: not available due to absence of the real data at those categories.
