Figure 3From: Steps to ensure accuracy in genotype and SNP calling from Illumina sequencing dataComparison of the calling performance of SAMtools, GATK and GlfMultiples in terms of dbSNP rate, Ti/Tv ratio, novel Ti/Tv ratio and NRD (non-reference discrepancy) from all regions, inside target regions, outside target regions with ≤ 200 bp distance and outside target regions > 200 bp distances from Illumina whole-exome sequencing data.Back to article page