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Table 1 NBS-encoding or RGH genes in cucurbitaceous crops

From: Genome-wide analysis of NBS-encoding disease resistance genes in Cucumis sativusand phylogenetic study of NBS-encoding genes in Cucurbitaceae crops

Name

Scientific name

JGI/GenBank accession numbers

Database/References

  

TIR-NBS

CC-NBS

 

Cucumber

Cucumis sativus

Cacsa.089350, Cacsa.091460, Cacsa.091470, Cacsa.091680, Cacsa.091690, Cacsa.091710, Cacsa.091780, Cacsa.091820, Cacsa.091840, Cacsa.178450, Cacsa.155730, Cacsa.237390, Cacsa.237410, Cacsa.237440, Cacsa.237520, Cacsa.237530, Cacsa.237540, Cacsa.237560, Cacsa.249360, Cacsa.275630, Cacsa.292710, Cacsa.338650, Cacsa.338660

Cacsa.017460, Cacsa.017490, Cacsa.088220, Cacsa.091880, Cacsa.094560, Cacsa.094580, Cacsa.094650, Cacsa.094660, Cacsa.094670, Cacsa.102240, Cacsa.123410, Cacsa.128030, Cacsa.128100, Cacsa.128110, Cacsa.128130, Cacsa.128140, Cacsa.132370, Cacsa.133510, Cacsa.163670, Cacsa.178360, Cacsa.178620, Cacsa.189390, Cacsa.237070, Cacsa.239860, Cacsa.248810, Cacsa.251930, Cacsa.277260, Cacsa.318890, Cacsa.326910, Cacsa.328080, Cacsa.337180, Cacsa.37190, Cacsa.338110, Cacsa.338190,

http://genome.jgi-psf.org/

Melon

Cucumis melo

AF354505, AF354506, AF354510, AF354507, AF354516, AF354511, AF354504, AF354513

AF354515, AF354509, AF354514, AF354508*, AF354512*

[56]

   

AY583855

[39]

  

JN230661-JN230670

 

In this study

Bottle gourd

Lagenaria siceraria

JN230598, JN230599, JN230601, JN230602, JN230604, JN230606, JN230607, JN230608, JN230609, JN230612, JN230614, JN230615, JN230618, JN230620-JN230633, JN230635, JN230636, JN230637, JN230638, JN230639,

JN230600, JN230603, JN230605, JN230610, JN230611, JN230613, JN230616, JN230617, JN230619, JN230634, JN230640,

In this study

Luffa

Luffa cylindrica

JN230641- JN230660

 

In this study

Watermelon

Citrullus lanatus

 

DQ156558- DQ156564

http://www.ncbi.nlm.nih.gov/

  

GU124539,GU124541, GU124544, GU124545,GU124546, GU124547, GU124548,GU124550, GU124551, GU124556,GU124557, GU124559, GU124562, GU124563,

GU124540, GU124542, GU124543, GU124553#, GU124554#, GU124560*

http://www.ncbi.nlm.nih.gov/

  

JN230671-JN230676, JN230678- JN230701

JN230677

In this study

 

Citrullus colocynthis

GU124549, GU124558, GU124561, GU124564,

GU124552*, GU124555*,

http://www.ncbi.nlm.nih.gov/

Squash

Cucurbita moschata

EF199755-EF199758, EF101660-EF101666

EF199760, EF199759, EF101667

http://www.ncbi.nlm.nih.gov/

  1. *These sequences are pseudogenes. #These genes contained no complete conserved motifs of P-loop to GLPL.