Transcriptome analyses reveal protein and domain families that delineate stage-related development in the economically important parasitic nematodes, Ostertagia ostertagi and Cooperia oncophora

Table 2 The three most abundant Pfam, InterPro, and GO terms associated with the peptides

		Number of peptides
	Description	C. oncophora	O. ostertagi
Pfam Code
PF00076	RNA recognition motif	208	226
PF00069	Protein kinase domain	170	192
PF01060	Transthyretin-like family	164	169
IPR code
IPR016040	NAD(P) - binding domain	269	336
IPR011009	Protein kinase-like domain	252	271
IPR012677	Nucleotide-binding alpha-beta plait	244	284
GO code
Biological process
GO:0006508	oxidation-reduction process	759	989
GO:0008152	metabolic process	713	842
GO:0006457	proteolysis	492	579
Cellular component
GO:0005622	intracellular	745	769
GO:0016020	membrane	575	729
GO:0016021	integral to membrane	544	626
Molecular Function
GO:0005515	protein binding	1537	1735
GO:0005524	ATP binding	877	1050
GO:0003824	Catalytic activity	848	869

ISSN: 1471-2164