Gene description | Mimp in promoter1 | SP2 | Protein in xylem sap | |||
---|---|---|---|---|---|---|
Encoded protein | Chromosome | FOXG or genomic location | Identified in search | Distance mimp IR-ATG [bp] | Â | Â |
SIX genes | Â | Â | Â | Â | Â | Â |
Six1 (corrected) | 14 | FOXG_16418 (incorrect) | no3 | 1192 | yes | yes |
Six2 | 14 | FOXG_16416 | yes | 211 | yes | yes |
Six3 | 14 | FOXG_16398 | yes | 232 | yes | yes |
Six5 | 14 | SC36[3273-3407] | no4 | 1132 | yes | yes |
Six6 | 14 | FOXG_14246 | yes | 668 | yes | yes |
Six7 | 14 | SC51[65216-65875] | no | (sequence gap) | yes | yes |
Novel effector candidates | Â | Â | Â | Â | Â | Â |
Six8 | 14, 14 | FOXG_17445, FOXG_16464 | no4 | 109 | yes | yes |
Six8b | 3, 3, 6, 6 | SC18[1122404-122824],SC18[862700-863120], SC41 [221648-222068], SC21[219855-220275] | yes | 1026, 1972 | yes | no |
Six9 | 14 | FOXG_14223 | yes | 249 | yes | yes |
Six10 | 14 | FOXG_17457 | no4 | 384 | yes | yes |
Six11 | 14 | SC22[806692-807024] | yes | 322, 852 | yes | yes |
Six12 | 14 | SC51[62415-62753] | no5 | 837 | no | yes |
Six13 | 6, 6 | FOXG_17131 (5' extended), SC42[126863-127192] | yes | 1971 | yes | yes |
Six14 | 14 | SC36[135867-136180] | yes | 211, 258, 681, 1215 | yes | yes |
FoAve1 | 14 | SC36[201730-202101] | yes | 788 | yes | no |
conserved secreted protein | 14 | FOXG_14254 | yes | 1312 | yes | no |
secreted protein | 15 | SC38[202206-202388] | yes | 1717 | yes | no |
secreted protein | 14 | SC51[127492-128836] | yes | 1236 | yes | no |
Secreted enzymes | Â | Â | Â | Â | Â | Â |
Orx1 | 14 | FOXG_14258;FOXG_14236 | yes | 554 | yes | yes |
catalase-peroxidase | 6, 14 | FOXG_17130, FOXG_17460 | yes | 921 | yes | yes |
metalloprotease | 3, 6 | SC47[78991-79260], SC42[41025-41294] | yes | 394 | yes | no |