Table 2 Number of markers and SNPs included in the integrated map, linkage group (LG) length, distribution of markers and SNPs per cM for each LG, total number of markers and SNPs on the A, C and whole genomes and ratio of marker and SNP number on the A genome relatively to the C genome (A/C)
Integrated map | |||||
|---|---|---|---|---|---|
LG | Number of markers | Number of SNPs | Length (cM) | Number of markers/cM | Number of SNPs/cM |
A1 | 533 | 425 | 120.1 | 4.44 | 3.54 |
A2 | 474 | 412 | 117.9 | 4.02 | 3.49 |
A3 | 664 | 504 | 137.5 | 4.83 | 3.67 |
A4 | 420 | 365 | 67.4 | 6.23 | 5.42 |
A5 | 578 | 493 | 106.4 | 5.43 | 4.63 |
A5 | 527 | 442 | 137.1 | 3.84 | 3.08 |
A7 | 458 | 370 | 109.7 | 4.18 | 3.37 |
A8 | 212 | 159 | 102.1 | 2.08 | 1.56 |
A9 | 557 | 416 | 133.2 | 4.18 | 3.12 |
A10 | 447 | 376 | 65.7 | 6.80 | 5.72 |
C1270 | 270 | 181 | 104.5 | 2.58 | 1.73 |
C2 | 312 | 236 | 126.5 | 2.47 | 1.87 |
C3 | 471 | 368 | 183.5 | 2.57 | 2.01 |
C4 | 312 | 220 | 132.9 | 2.35 | 1.66 |
C5 | 158 | 93 | 144.7 | 1.09 | 0.64 |
C6 | 257 | 192 | 111.2 | 2.31 | 1.73 |
C7 | 247 | 189 | 103.3 | 2.39 | 1.83 |
C8 | 208 | 149 | 119 | 1.75 | 1.25 |
C9 | 262 | 194 | 128.3 | 2.04 | 1.51 |
Total | 7367 | 5764 | 2250.9 | 3.27 | 2.56 |
Total A | 4870 | 3942 | 1097.1 | 4.60 | 3.76 |
Total C | 2497 | 1822 | 1153.9 | 2.17 | 1.58 |
A/C | 2.0 | 2.0 | 1.0 | 2.1 | 2.4 |