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Table 1 Statistical description of the coverage distributions using 100-bp windows and after filtering the data for the Pf exome

From: A Poisson hierarchical modelling approach to detecting copy number variation in sequence coverage data

      

Coverage

Samples

Origin

Number of reads

Mean

Variance

Range

=0

≀10

≄250

≄500

3D7

Africa

19,590,258

162.8

767.4

0–794

1

3

25

14

HB3

Honduras

14,024,161

116.6

585.6

0–449

188

262

23

0

DD2

Indonesia

21,080,366

175.2

1861.9

0–749

139

214

873

470

7G8

Brazil

13,736,522

114.2

2141.2

0–794

188

1419

365

29

GB4

Ghana

17,157,171

142.6

2087.3

0–955

151

540

274

7

OX005

Ghana

17,214,916

143.1

4387.9

0–1386

187

308

7691

109

OX006

Kenya

20,850,309

173.3

1072.1

0–733

46

102

656

7

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BMC Genomics

ISSN: 1471-2164

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