Table 2 Genes selected from microarray data for validation by qPCR
From: PacC and pH–dependent transcriptome of the mycotrophic fungus Trichoderma virens
Protein ID | Sequence | Gene homology |
|---|---|---|
10799 | s CGACCGGCCAGGAGAGCAC | regulation of pH - Na/H exchanger |
as GGCTTGAACACGGGCTTGG | ||
27509 | s CCCAGAACTACCGCCTTGAA | CVNH domain-containing protein |
as TCAACCCAGCTACCGTCCAC | ||
28147 | s GCAAGAACATCCGCGACGAG | C-type lectin |
as CGCATAGCCTTCCTGAGCAT | ||
28324 | s GCCAACGAAGAACGAAGCAG | Hypothetical |
as CTGATCGCCCTGTCCCATAA | ||
34827 | s CCGAGTCTCTTGTTGCTGTCCTA | ATPase |
as TCGGAGCAGATGTTGGTGAC | ||
56294 | s CCGCAGGTGAGAATCAGAGAGT | ATPase |
as CGTCTTCGTCTGTCGGTGTG | ||
68068 | s TGAGGATCACTGGCATTGCTC | predicted small secreted cysteine-rich protein |
as GGTAGGTGGGAGATGGCACA | ||
74915 | s TTCGTCATGGAGGCTGCTG | ATPase |
as ACCGCAGATGACACCGAAAT | ||
75759 | s AATGATACGATGAACACACGACCT | pH-response regulator protein palC |
as GTGAATCTCACGGCCCGAAG | ||
77023 | s TTCCACCTCGGCAAATATGATG | methyltransferase |
as TCCTGGCCGTATCAATGAAGA | ||
79497 | s TCTCGTTGGTGCCTGGATTG | H+/oligopeptide symporter |
as CAGAGGCGACGAGGATAACG | ||
89677 | s GCGCTGATACCTACTGCCTTGA | Fe2+/Zn2+ regulated transporter |
as ATCGGGATCTGCAGTGTCGT | ||
40391 | s ACGCCGAGACGCTCTATGAAC | Transcription factor PacC |
as GGTGGTGCGACAAGAGTTCC | ||
67662 | s GCTGACCTCCGACTGATTGAAG | ATPase, P-type |
as GCCAGTGGCATCATCAAAGA | ||
43392 | s CCTCTGTAACCTCGATTCCAACG | peptidylprolyl isomerase A [PPIA] - normalization gene |
as AGCTCTGGCTCCTGGGTAGG | ||
77851 | s CGTACTACAGCCGCTACCAGACC | ribosomal protein L5 [RPL5] - normalization gene |
as AGGCGGTACTTGGGAGCATT | ||
88010 | s ACTTCAACGAGGCTTCTGGCAAC | Tubulin - normalization gene |
as CGGAACAGCTGGCCAAAGG | ||
91925 | s AGGAAGAAGTTGCTGCCCTCGTCATCGACA | Actin - normalization gene |
as CCCATACCGATCATGATACCATGGTGACG |