Table 3 Additional pH regulated genes with functional annotation
From: PacC and pH–dependent transcriptome of the mycotrophic fungus Trichoderma virens
Protein ID | Regulation in T. virens | Homology | Species and regulation |
|---|---|---|---|
72478 | upregulated at alkaline pH | GPR1/FUN34/yaaH ammonia exporter | upregulated at alkaline pH in Colletotrichum[14] |
76718 | upregulated at alkaline pH | glucose-repressible protein (GRG1) | upregulated at alkaline pH in Colletotrichum[14] |
58111 | upregulated at alkaline pH, PacC dependent | DFG5, a cell-wall glycoprotein involved in tolerance to alkaline pH | Upregulated at alkaline pH in Candida albicans[58, 59]; in S. cerevisiae, expression depends on alkaline pH stress and the cell wall integrity MAPK Slt2 [57] |
83099 | downregulated at alkaline pH | like NAD+ epimerase/dehydratase family, EPME | alkaline pH downregulated in Colletotrichum[14] |
73483 | downregulated at alkaline pH (2.5 downregulation trend, though below the level of significance for our cut-off criteria) | high affinity glucose transporter | alkaline pH downregulated in Colletotrichum[14] |