Biclustering for the comprehensive search of correlated gene expression patterns using clustered seed expansion

BMC Genomics

Table 4 Summary statistics of biclustering algorithms for the lung cancer dataset

Method	Count	Average \|I x J\|	Gene cov.	Condition cov.	Cell cov.
BICLIC	6019	2302.8	1	1	0.999
BICLIC	(3734)	(4.2)	(0.389)	(1)	(0.021)
CPB	386	4594.8	0.672	1	0.344
QUBIC	1355	68.2	0.543	1	0.048

Values in parentheses denote the values of seed biclusters of BICLIC. The columns “Count”, “Average |I x J|”, “Gene cov.”, “Condition cov.”, and “Cell cov.” show the numbers of biclusters, average sizes of biclusters, coverage of biclusters in the gene dimension, coverage of biclusters in the condition dimension, and coverage of biclusters for all cells in the matrix.

ISSN: 1471-2164