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Table 2 Comparing mean mate pair distance between H37Rv and single copy reference genomes

From: The mutation rate of mycobacterial repetitive unit loci in strains of M. tuberculosisfrom cynomolgus macaque infection

Strain H37Rv (MIRU) Single copy (MIRU) H37Rv (+/− 100 bp) Single copy (+/− 100 bp)
A-1 165 128 157 146
A-3 188 137 178 165
B-1 163 124 153 142
C-1 156 120 148 138
C-2 206 159 190 174
E-1 205 159 188 173
F-1 174 161 172 169
G-1 157 119 147 137
G-3 235 168 203 177
H-2 201 159 188 174
H-3 199 155 184 170
I-1 218 180 208 193
I-2 230 187 218 200
I-3 223 183 204 198
I-4 224 176 212 193
I-6 204 157 184 171
I-7 202 151 182 166
  1. Mean mate pair distance values were calculated for each strain at MIRU locus 3192. Values were gathered for the MIRU coordinates as well as the surrounding (+/100 bp) region.